Carnation DB

Dca47289.1

Annotation

5-exons
f-1
sp|B9GVZ3_POPTR#Nucleoside diphosphate kinase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_712245#GO:0005524;GO:0004550;GO:0006241;GO:0006183;GO:0006228#2F3P0C
Repeat List (scaffold5733)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47289.1	1	173	173	67.63	173	66	1e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9GVZ3_POPTR	1	174	174	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47289.1	25	173	173	56.64	149	64	5e-56
Target_name	Start	End	Length	Cov(%)
AT1G17410.1	27	181	181	85.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5733	Augus-PASA	mRNA	25651	30202	.	+	.	ID=Dca47289.1;Parent=Dca47289
scaffold5733	Augus-PASA	exon	25651	25712	.	+	.	ID=Dca47289.1.exon1;Parent=Dca47289.1
scaffold5733	Augus-PASA	exon	27136	27360	.	+	.	ID=Dca47289.1.exon2;Parent=Dca47289.1
scaffold5733	Augus-PASA	exon	29419	29526	.	+	.	ID=Dca47289.1.exon3;Parent=Dca47289.1
scaffold5733	Augus-PASA	exon	29711	29805	.	+	.	ID=Dca47289.1.exon4;Parent=Dca47289.1
scaffold5733	Augus-PASA	exon	30171	30202	.	+	.	ID=Dca47289.1.exon5;Parent=Dca47289.1