Carnation DB

Dca47328.1

Annotation

5-exons
f-1
sp|D7TG95_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0558g00020#unknown#0F0P0C
sp|B9SX77_RICCO#Filamin-A-interacting protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0858960#unknown#0F0P0C
Repeat List (scaffold5744)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47328.1	28	355	370	50.27	328	57	9e-89
Target_name	Start	End	Length	Cov(%)
sp\|D7TG95_VITVI	3	332	1117	29.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47328.1	1	355	370	45.94	355	45	9e-75
Target_name	Start	End	Length	Cov(%)
AT5G65770.2	1	370	1042	35.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5744	Augustus	mRNA	37046	40329	.	+	.	ID=Dca47328.1;Parent=Dca47328
scaffold5744	Augustus	exon	37046	37297	.	+	.	ID=Dca47328.1.exon1;Parent=Dca47328.1
scaffold5744	Augustus	exon	38883	39092	.	+	.	ID=Dca47328.1.exon2;Parent=Dca47328.1
scaffold5744	Augustus	exon	39212	39465	.	+	.	ID=Dca47328.1.exon3;Parent=Dca47328.1
scaffold5744	Augustus	exon	39822	40092	.	+	.	ID=Dca47328.1.exon4;Parent=Dca47328.1
scaffold5744	Augustus	exon	40204	40329	.	+	.	ID=Dca47328.1.exon5;Parent=Dca47328.1