Carnation DB

Dca47330.1

Annotation

6-exons
f-1
sp|G5DWR0_SILLA#Branched-chain-amino-acid aminotransferase#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0052656;GO:0052654;GO:0052655;GO:0009081#3F1P0C
Repeat List (scaffold5744)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47330.1	59	268	270	74.07	210	96	1e-118
Target_name	Start	End	Length	Cov(%)
sp\|G5DWR0_SILLA	1	210	354	59.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47330.1	27	268	270	62.96	242	69	9e-95
Target_name	Start	End	Length	Cov(%)
AT3G49680.1	21	268	413	60.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5744	Augustus	mRNA	46601	49681	.	+	.	ID=Dca47330.1;Parent=Dca47330
scaffold5744	Augustus	exon	46601	46729	.	+	.	ID=Dca47330.1.exon1;Parent=Dca47330.1
scaffold5744	Augustus	exon	47570	47655	.	+	.	ID=Dca47330.1.exon2;Parent=Dca47330.1
scaffold5744	Augustus	exon	48726	48900	.	+	.	ID=Dca47330.1.exon3;Parent=Dca47330.1
scaffold5744	Augustus	exon	49077	49253	.	+	.	ID=Dca47330.1.exon4;Parent=Dca47330.1
scaffold5744	Augustus	exon	49348	49479	.	+	.	ID=Dca47330.1.exon5;Parent=Dca47330.1
scaffold5744	Augustus	exon	49568	49681	.	+	.	ID=Dca47330.1.exon6;Parent=Dca47330.1