Dca47393.1
Annotation
- 4-exons
- f-1
- sp|A5B780_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_000584#GO:0003676;GO:0015074#1F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold576)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47393.1 |
94 |
547 |
551 |
40.65 |
454 |
44 |
3e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B780_VITVI |
521 |
1036 |
1039 |
49.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47393.1 |
94 |
542 |
551 |
34.11 |
449 |
36 |
1e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
872 |
1391 |
1401 |
37.11 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold576 |
Augustus |
mRNA |
35820 |
37734 |
. |
- |
. |
ID=Dca47393.1;Parent=Dca47393 |
| scaffold576 |
Augustus |
exon |
35820 |
36550 |
. |
- |
. |
ID=Dca47393.1.exon1;Parent=Dca47393.1 |
| scaffold576 |
Augustus |
exon |
36637 |
36841 |
. |
- |
. |
ID=Dca47393.1.exon2;Parent=Dca47393.1 |
| scaffold576 |
Augustus |
exon |
36940 |
37184 |
. |
- |
. |
ID=Dca47393.1.exon3;Parent=Dca47393.1 |
| scaffold576 |
Augustus |
exon |
37260 |
37734 |
. |
- |
. |
ID=Dca47393.1.exon4;Parent=Dca47393.1 |
