Dca47417.1
Annotation
- 3-exons
- f-1
- sp|B9IFT2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_257136#unknown#0F0P0C
- sp|Q94F48_ARATH#AT5g03560/F12E4#Arabidopsis thaliana (Mouse-ear cress)#OrderedLocusNames=At5g03560#unknown#0F0P0C
- Repeat List (scaffold5762)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47417.1 |
53 |
224 |
226 |
56.63 |
172 |
75 |
1e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IFT2_POPTR |
1 |
172 |
173 |
99.42 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47417.1 |
18 |
224 |
226 |
54.86 |
207 |
60 |
1e-67
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0560600-01 |
12 |
215 |
217 |
94 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5762 |
Augustus |
mRNA |
3289 |
6216 |
. |
+ |
. |
ID=Dca47417.1;Parent=Dca47417 |
| scaffold5762 |
Augustus |
exon |
3289 |
3548 |
. |
+ |
. |
ID=Dca47417.1.exon1;Parent=Dca47417.1 |
| scaffold5762 |
Augustus |
exon |
4742 |
5072 |
. |
+ |
. |
ID=Dca47417.1.exon2;Parent=Dca47417.1 |
| scaffold5762 |
Augustus |
exon |
6127 |
6216 |
. |
+ |
. |
ID=Dca47417.1.exon3;Parent=Dca47417.1 |
