Carnation DB

Dca47458.1

Annotation

6-exons
f-1
sp|A5C043_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_023296#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold5775)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47458.1	160	287	875	5.71	128	40	2e-12
Target_name	Start	End	Length	Cov(%)
sp\|A5C043_VITVI	390	501	1855	6.03

AtOs (Arabidopsis thaliana & Oryza sativa)

No data

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5775	Augustus	mRNA	8889	12290	.	-	.	ID=Dca47458.1;Parent=Dca47458
scaffold5775	Augustus	exon	8889	9505	.	-	.	ID=Dca47458.1.exon1;Parent=Dca47458.1
scaffold5775	Augustus	exon	9622	10384	.	-	.	ID=Dca47458.1.exon2;Parent=Dca47458.1
scaffold5775	Augustus	exon	10655	11041	.	-	.	ID=Dca47458.1.exon3;Parent=Dca47458.1
scaffold5775	Augustus	exon	11158	11493	.	-	.	ID=Dca47458.1.exon4;Parent=Dca47458.1
scaffold5775	Augustus	exon	11580	11887	.	-	.	ID=Dca47458.1.exon5;Parent=Dca47458.1
scaffold5775	Augustus	exon	12074	12290	.	-	.	ID=Dca47458.1.exon6;Parent=Dca47458.1