Dca47516.1
Annotation
- 3-exons
- f-1
- sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold579)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47516.1 |
56 |
779 |
793 |
46.78 |
724 |
47 |
6e-179
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AFE2_VITVI |
553 |
1264 |
1269 |
56.1 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47516.1 |
65 |
465 |
793 |
16.39 |
401 |
32 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
605 |
988 |
1401 |
27.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold579 |
Augustus |
mRNA |
62883 |
65891 |
. |
- |
. |
ID=Dca47516.1;Parent=Dca47516 |
| scaffold579 |
Augustus |
exon |
62883 |
63871 |
. |
- |
. |
ID=Dca47516.1.exon1;Parent=Dca47516.1 |
| scaffold579 |
Augustus |
exon |
64178 |
65384 |
. |
- |
. |
ID=Dca47516.1.exon2;Parent=Dca47516.1 |
| scaffold579 |
Augustus |
exon |
65706 |
65891 |
. |
- |
. |
ID=Dca47516.1.exon3;Parent=Dca47516.1 |
