Dca47574.1
Annotation
- 2-exons
- f-1
- sp|B9H5L3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_861564#unknown#0F0P0C
- AT2G21860.1 | Symbols: | violaxanthin de-epoxidase-related | chr2:9318333-9319990 REVERSE LENGTH=522
- Repeat List (scaffold58)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47574.1 |
69 |
539 |
539 |
63.07 |
471 |
73 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9H5L3_POPTR |
70 |
539 |
539 |
87.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47574.1 |
65 |
534 |
539 |
59.55 |
470 |
69 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G21860.1 |
61 |
514 |
522 |
86.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold58 |
Augustus |
mRNA |
186319 |
188262 |
. |
+ |
. |
ID=Dca47574.1;Parent=Dca47574 |
| scaffold58 |
Augustus |
exon |
186319 |
186624 |
. |
+ |
. |
ID=Dca47574.1.exon1;Parent=Dca47574.1 |
| scaffold58 |
Augus-PASA |
exon |
186949 |
188262 |
. |
+ |
. |
ID=Dca47574.1.exon2;Parent=Dca47574.1 |
