Carnation DB

Dca47578.1

Annotation

6-exons
f-1
sp|D7TQR2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01270#GO:0004725;GO:0008138#2F0P0C
sp|B9S842_RICCO#Dual specificity protein phosphatase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0692450#GO:0004725;GO:0008138#2F0P0C
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47578.1	19	379	379	67.01	361	69	6e-150
Target_name	Start	End	Length	Cov(%)
sp\|D7TQR2_VITVI	1	366	366	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47578.1	19	379	379	56.2	361	59	3e-115
Target_name	Start	End	Length	Cov(%)
Os11t0136800-02	1	356	357	99.71

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augustus	mRNA	204195	206333	.	-	.	ID=Dca47578.1;Parent=Dca47578
scaffold58	Augustus	exon	204195	204349	.	-	.	ID=Dca47578.1.exon1;Parent=Dca47578.1
scaffold58	Augustus	exon	204440	204748	.	-	.	ID=Dca47578.1.exon2;Parent=Dca47578.1
scaffold58	Augustus	exon	204877	204955	.	-	.	ID=Dca47578.1.exon3;Parent=Dca47578.1
scaffold58	Augustus	exon	205082	205146	.	-	.	ID=Dca47578.1.exon4;Parent=Dca47578.1
scaffold58	Augustus	exon	205421	205473	.	-	.	ID=Dca47578.1.exon5;Parent=Dca47578.1
scaffold58	Augustus	exon	205855	206333	.	-	.	ID=Dca47578.1.exon6;Parent=Dca47578.1