Carnation DB

Dca47581.1

Annotation

8-exons
f-1
sp|F6HQN4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01170#GO:0003824#1F0P0C
sp|B9RU86_RICCO#Hydroxymethylglutaryl-CoA lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1635180#GO:0004419#1F0P0C
Repeat List (scaffold58)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47581.1	88	403	403	61.78	316	79	3e-146
Target_name	Start	End	Length	Cov(%)
sp\|F6HQN4_VITVI	80	396	396	80.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47581.1	101	403	403	60.04	303	80	6e-141
Target_name	Start	End	Length	Cov(%)
AT2G26800.2	164	468	468	65.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold58	Augustus	mRNA	228064	230589	.	+	.	ID=Dca47581.1;Parent=Dca47581
scaffold58	Augustus	exon	228064	228215	.	+	.	ID=Dca47581.1.exon1;Parent=Dca47581.1
scaffold58	Augus-PASA	exon	228407	228536	.	+	.	ID=Dca47581.1.exon2;Parent=Dca47581.1
scaffold58	Augustus	exon	228647	228832	.	+	.	ID=Dca47581.1.exon3;Parent=Dca47581.1
scaffold58	Augus-PASA	exon	229112	229189	.	+	.	ID=Dca47581.1.exon4;Parent=Dca47581.1
scaffold58	Augus-PASA	exon	229297	229460	.	+	.	ID=Dca47581.1.exon5;Parent=Dca47581.1
scaffold58	Augus-PASA	exon	229537	229673	.	+	.	ID=Dca47581.1.exon6;Parent=Dca47581.1
scaffold58	Augus-PASA	exon	229978	230093	.	+	.	ID=Dca47581.1.exon7;Parent=Dca47581.1
scaffold58	Augus-PASA	exon	230341	230589	.	+	.	ID=Dca47581.1.exon8;Parent=Dca47581.1