Carnation DB

Dca47608.1

Annotation

8-exons
f-1
sp|F6GX62_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0219g00120#unknown#0F0P0C
AT5G40670.1 | Symbols: | PQ-loop repeat family protein / transmembrane family protein | chr5:16285968-16287591 FORWARD LENGTH=270
Repeat List (scaffold580)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47608.1	1	261	273	72.52	261	76	5e-116
Target_name	Start	End	Length	Cov(%)
sp\|F6GX62_VITVI	1	259	291	89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47608.1	1	269	273	65.93	269	67	5e-105
Target_name	Start	End	Length	Cov(%)
AT5G40670.1	1	269	270	99.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold580	Augustus	mRNA	29159	31108	.	-	.	ID=Dca47608.1;Parent=Dca47608
scaffold580	Augustus	exon	29159	29302	.	-	.	ID=Dca47608.1.exon1;Parent=Dca47608.1
scaffold580	Augustus	exon	29405	29454	.	-	.	ID=Dca47608.1.exon2;Parent=Dca47608.1
scaffold580	Augustus	exon	29556	29673	.	-	.	ID=Dca47608.1.exon3;Parent=Dca47608.1
scaffold580	Augustus	exon	29782	29824	.	-	.	ID=Dca47608.1.exon4;Parent=Dca47608.1
scaffold580	Augustus	exon	29940	30064	.	-	.	ID=Dca47608.1.exon5;Parent=Dca47608.1
scaffold580	Augustus	exon	30160	30249	.	-	.	ID=Dca47608.1.exon6;Parent=Dca47608.1
scaffold580	Augustus	exon	30394	30526	.	-	.	ID=Dca47608.1.exon7;Parent=Dca47608.1
scaffold580	Augustus	exon	30990	31108	.	-	.	ID=Dca47608.1.exon8;Parent=Dca47608.1