Dca47638.1
Annotation
- 3-exons
- f-1
- sp|D7L8A9_ARALL#60S ribosomal protein L4/L1#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_478282#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold5806)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47638.1 |
9 |
411 |
483 |
65.01 |
403 |
78 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7L8A9_ARALL |
4 |
406 |
406 |
99.26 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47638.1 |
9 |
411 |
483 |
64.38 |
403 |
78 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G09630.1 |
4 |
406 |
406 |
99.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5806 |
Augustus |
mRNA |
16400 |
18977 |
. |
- |
. |
ID=Dca47638.1;Parent=Dca47638 |
| scaffold5806 |
Augustus |
exon |
16400 |
16619 |
. |
- |
. |
ID=Dca47638.1.exon1;Parent=Dca47638.1 |
| scaffold5806 |
Augustus |
exon |
17212 |
17321 |
. |
- |
. |
ID=Dca47638.1.exon2;Parent=Dca47638.1 |
| scaffold5806 |
Augus-PASA |
exon |
17856 |
18977 |
. |
- |
. |
ID=Dca47638.1.exon3;Parent=Dca47638.1 |
