Carnation DB

Dca47672.1

Annotation

6-exons
f-1
sp|D7M6R8_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_488355#GO:0030246;GO:0016853;GO:0019318#2F1P0C
AT5G15140.1 | Symbols: | Galactose mutarotase-like superfamily protein | chr5:4908686-4910670 FORWARD LENGTH=490
Repeat List (scaffold581)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47672.1	28	364	370	59.18	337	65	6e-122
Target_name	Start	End	Length	Cov(%)
sp\|D7M6R8_ARALL	150	481	484	68.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47672.1	28	364	370	58.1	337	64	2e-120
Target_name	Start	End	Length	Cov(%)
AT5G15140.1	156	487	490	67.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold581	Augus-PASA	mRNA	132784	135903	.	-	.	ID=Dca47672.1;Parent=Dca47672
scaffold581	Augus-PASA	exon	132784	133114	.	-	.	ID=Dca47672.1.exon1;Parent=Dca47672.1
scaffold581	Augus-PASA	exon	133246	133558	.	-	.	ID=Dca47672.1.exon2;Parent=Dca47672.1
scaffold581	Augus-PASA	exon	133761	133868	.	-	.	ID=Dca47672.1.exon3;Parent=Dca47672.1
scaffold581	Augus-PASA	exon	134161	134284	.	-	.	ID=Dca47672.1.exon4;Parent=Dca47672.1
scaffold581	Augus-PASA	exon	134984	135033	.	-	.	ID=Dca47672.1.exon5;Parent=Dca47672.1
scaffold581	Augus-PASA	exon	135717	135903	.	-	.	ID=Dca47672.1.exon6;Parent=Dca47672.1