Carnation DB

Dca47688.1

Annotation

10-exons
f-1
sp|B9HKQ3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_874901#GO:0016597;GO:0008152#1F1P0C
sp|B9S5B3_RICCO#Amino acid binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0888830#unknown#0F0P0C
Repeat List (scaffold5815)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47688.1	70	284	284	62.32	215	82	3e-100
Target_name	Start	End	Length	Cov(%)
sp\|B9HKQ3_POPTR	3	218	218	99.08

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47688.1	70	284	284	57.74	215	77	1e-94
Target_name	Start	End	Length	Cov(%)
AT5G04740.1	87	301	301	71.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5815	Augustus	mRNA	2733	9732	.	+	.	ID=Dca47688.1;Parent=Dca47688
scaffold5815	Augustus	exon	2733	2896	.	+	.	ID=Dca47688.1.exon1;Parent=Dca47688.1
scaffold5815	Augustus	exon	3436	3472	.	+	.	ID=Dca47688.1.exon2;Parent=Dca47688.1
scaffold5815	Augustus	exon	4579	4698	.	+	.	ID=Dca47688.1.exon3;Parent=Dca47688.1
scaffold5815	Augustus	exon	5414	5508	.	+	.	ID=Dca47688.1.exon4;Parent=Dca47688.1
scaffold5815	Augustus	exon	6527	6611	.	+	.	ID=Dca47688.1.exon5;Parent=Dca47688.1
scaffold5815	Augustus	exon	6738	6797	.	+	.	ID=Dca47688.1.exon6;Parent=Dca47688.1
scaffold5815	Augustus	exon	8459	8514	.	+	.	ID=Dca47688.1.exon7;Parent=Dca47688.1
scaffold5815	Augustus	exon	8639	8744	.	+	.	ID=Dca47688.1.exon8;Parent=Dca47688.1
scaffold5815	Augustus	exon	8842	8910	.	+	.	ID=Dca47688.1.exon9;Parent=Dca47688.1
scaffold5815	Augustus	exon	9670	9732	.	+	.	ID=Dca47688.1.exon10;Parent=Dca47688.1