Carnation DB

Dca47779.1

Annotation

7-exons
f-1
sp|A5BX90_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004748#GO:0016021;GO:0005524;GO:0042626;GO:0003676;GO:0008270#4F0P1C
AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) | chr3:4025276-4028999 REVERSE LENGTH=524
Repeat List (scaffold583)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47779.1	80	168	183	22.4	89	45	1e-17
Target_name	Start	End	Length	Cov(%)
sp\|A5BX90_VITVI	378	467	1504	5.98

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47779.1	79	153	183	19.12	75	44	3e-14
Target_name	Start	End	Length	Cov(%)
AT3G12680.1	171	251	524	15.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold583	Augus-PASA	mRNA	59306	61766	.	-	.	ID=Dca47779.1;Parent=Dca47779
scaffold583	Augus-PASA	exon	59306	59473	.	-	.	ID=Dca47779.1.exon1;Parent=Dca47779.1
scaffold583	Augus-PASA	exon	60406	60522	.	-	.	ID=Dca47779.1.exon2;Parent=Dca47779.1
scaffold583	Augus-PASA	exon	60715	60768	.	-	.	ID=Dca47779.1.exon3;Parent=Dca47779.1
scaffold583	Augus-PASA	exon	60877	60995	.	-	.	ID=Dca47779.1.exon4;Parent=Dca47779.1
scaffold583	Augus-PASA	exon	61082	61128	.	-	.	ID=Dca47779.1.exon5;Parent=Dca47779.1
scaffold583	Augus-PASA	exon	61219	61256	.	-	.	ID=Dca47779.1.exon6;Parent=Dca47779.1
scaffold583	Augustus	exon	61758	61766	.	-	.	ID=Dca47779.1.exon7;Parent=Dca47779.1