Carnation DB

Dca47780.1

Annotation

6-exons
f-1
sp|D7T0Z4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0085g01180#GO:0003676;GO:0008270#2F0P0C
AT3G12680.1 | Symbols: HUA1 | floral homeotic protein (HUA1) | chr3:4025276-4028999 REVERSE LENGTH=524
Repeat List (scaffold583)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47780.1	142	247	256	15.23	106	37	2e-12
Target_name	Start	End	Length	Cov(%)
sp\|D7T0Z4_VITVI	417	498	535	15.32

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca47780.1	142	247	256	14.84	106	35	6e-13
Target_name	Start	End	Length	Cov(%)
AT3G12680.1	416	499	524	16.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold583	Augustus	mRNA	61875	68162	.	-	.	ID=Dca47780.1;Parent=Dca47780
scaffold583	Augustus	exon	61875	61961	.	-	.	ID=Dca47780.1.exon1;Parent=Dca47780.1
scaffold583	Augustus	exon	62061	62126	.	-	.	ID=Dca47780.1.exon2;Parent=Dca47780.1
scaffold583	Augustus	exon	62387	62449	.	-	.	ID=Dca47780.1.exon3;Parent=Dca47780.1
scaffold583	Augustus	exon	64197	64397	.	-	.	ID=Dca47780.1.exon4;Parent=Dca47780.1
scaffold583	Augustus	exon	66328	66431	.	-	.	ID=Dca47780.1.exon5;Parent=Dca47780.1
scaffold583	Augustus	exon	67913	68162	.	-	.	ID=Dca47780.1.exon6;Parent=Dca47780.1