Dca47864.1
Annotation
- 4-exons
- f-1
- sp|B9GKK9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_640520#GO:0005673;GO:0006367#0F1P1C
- Os10t0397200-01 Transcription initiation factor TFIIE, beta subunit domain containing protein.
- Repeat List (scaffold585)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47864.1 |
1 |
292 |
295 |
73.55 |
292 |
75 |
1e-117
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GKK9_POPTR |
1 |
284 |
284 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47864.1 |
1 |
292 |
295 |
62.37 |
292 |
64 |
2e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os10t0397200-01 |
1 |
279 |
280 |
99.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold585 |
Augustus |
mRNA |
114286 |
116473 |
. |
+ |
. |
ID=Dca47864.1;Parent=Dca47864 |
| scaffold585 |
Augustus |
exon |
114286 |
114576 |
. |
+ |
. |
ID=Dca47864.1.exon1;Parent=Dca47864.1 |
| scaffold585 |
Augus-PASA |
exon |
114679 |
114810 |
. |
+ |
. |
ID=Dca47864.1.exon2;Parent=Dca47864.1 |
| scaffold585 |
Augus-PASA |
exon |
114901 |
115017 |
. |
+ |
. |
ID=Dca47864.1.exon3;Parent=Dca47864.1 |
| scaffold585 |
Augus-PASA |
exon |
116126 |
116473 |
. |
+ |
. |
ID=Dca47864.1.exon4;Parent=Dca47864.1 |
