Dca47870.1
Annotation
- 4-exons
- f-1
- sp|F2DPV8_HORVD#Predicted protein#Hordeum vulgare var distichum (Two-rowed barley)#unknown#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
- Os11t0197600-01 Transcriptional factor B3 family protein.
- Repeat List (scaffold585)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47870.1 |
24 |
203 |
208 |
25.96 |
180 |
30 |
5e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F2DPV8_HORVD |
526 |
696 |
701 |
24.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47870.1 |
104 |
193 |
208 |
17.78 |
90 |
41 |
5e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G33280.1 |
237 |
319 |
337 |
24.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold585 |
Augustus |
mRNA |
146816 |
147990 |
. |
+ |
. |
ID=Dca47870.1;Parent=Dca47870 |
| scaffold585 |
Augustus |
exon |
146816 |
146846 |
. |
+ |
. |
ID=Dca47870.1.exon1;Parent=Dca47870.1 |
| scaffold585 |
Augustus |
exon |
147149 |
147419 |
. |
+ |
. |
ID=Dca47870.1.exon2;Parent=Dca47870.1 |
| scaffold585 |
Augustus |
exon |
147572 |
147584 |
. |
+ |
. |
ID=Dca47870.1.exon3;Parent=Dca47870.1 |
| scaffold585 |
Augus-PASA |
exon |
147679 |
147990 |
. |
+ |
. |
ID=Dca47870.1.exon4;Parent=Dca47870.1 |
