Dca47930.1
Annotation
- 4-exons
- f-1
- sp|F6HNY2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g01180#GO:0043169;GO:0004553;GO:0005975#2F1P0C
- sp|B9SXY4_RICCO#Glucan endo-1,3-beta-glucosidase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1207370#GO:0043169;GO:0042973;GO:0005975#2F1P0C
- Repeat List (scaffold5863)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47930.1 |
10 |
455 |
455 |
59.56 |
446 |
61 |
9e-164
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F6HNY2_VITVI |
8 |
446 |
447 |
98.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47930.1 |
28 |
454 |
455 |
51.64 |
427 |
55 |
1e-137
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G55430.1 |
28 |
449 |
449 |
93.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5863 |
Augustus |
mRNA |
4430 |
7833 |
. |
+ |
. |
ID=Dca47930.1;Parent=Dca47930 |
| scaffold5863 |
Augustus |
exon |
4430 |
4894 |
. |
+ |
. |
ID=Dca47930.1.exon1;Parent=Dca47930.1 |
| scaffold5863 |
Augustus |
exon |
5745 |
6329 |
. |
+ |
. |
ID=Dca47930.1.exon2;Parent=Dca47930.1 |
| scaffold5863 |
Augus-PASA |
exon |
7300 |
7591 |
. |
+ |
. |
ID=Dca47930.1.exon3;Parent=Dca47930.1 |
| scaffold5863 |
Augus-PASA |
exon |
7808 |
7833 |
. |
+ |
. |
ID=Dca47930.1.exon4;Parent=Dca47930.1 |
