Dca47988.1
Annotation
- 2-exons
- f-1
- sp|A5C6U7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_004899#GO:0005622;GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold5877)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47988.1 |
314 |
526 |
531 |
17.13 |
213 |
42 |
1e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C6U7_VITVI |
1008 |
1225 |
2452 |
8.89 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca47988.1 |
70 |
317 |
531 |
16.38 |
248 |
35 |
4e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
557 |
796 |
1539 |
15.59 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5877 |
Augustus |
mRNA |
12914 |
15172 |
. |
- |
. |
ID=Dca47988.1;Parent=Dca47988 |
| scaffold5877 |
Augustus |
exon |
12914 |
13569 |
. |
- |
. |
ID=Dca47988.1.exon1;Parent=Dca47988.1 |
| scaffold5877 |
Augustus |
exon |
14233 |
15172 |
. |
- |
. |
ID=Dca47988.1.exon2;Parent=Dca47988.1 |
