Carnation DB

Dca48081.1

Annotation

8-exons
f-1
sp|D7TDK7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0127g00120#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
sp|B9SPH9_RICCO#Polygalacturonase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0023860#GO:0005576;GO:0047911;GO:0004650;GO:0005975;GO:0007047#2F2P1C
Repeat List (scaffold59)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48081.1	23	473	475	63.15	451	65	3e-171
Target_name	Start	End	Length	Cov(%)
sp\|D7TDK7_VITVI	22	478	479	95.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48081.1	1	471	475	59.57	471	59	4e-159
Target_name	Start	End	Length	Cov(%)
AT3G26610.1	1	468	470	99.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold59	Augustus	mRNA	57089	61609	.	-	.	ID=Dca48081.1;Parent=Dca48081
scaffold59	Augustus	exon	57089	57505	.	-	.	ID=Dca48081.1.exon1;Parent=Dca48081.1
scaffold59	Augustus	exon	57720	57828	.	-	.	ID=Dca48081.1.exon2;Parent=Dca48081.1
scaffold59	Augustus	exon	57940	58021	.	-	.	ID=Dca48081.1.exon3;Parent=Dca48081.1
scaffold59	Augustus	exon	59145	59352	.	-	.	ID=Dca48081.1.exon4;Parent=Dca48081.1
scaffold59	Augustus	exon	59433	59474	.	-	.	ID=Dca48081.1.exon5;Parent=Dca48081.1
scaffold59	Augustus	exon	60022	60195	.	-	.	ID=Dca48081.1.exon6;Parent=Dca48081.1
scaffold59	Augustus	exon	60722	60850	.	-	.	ID=Dca48081.1.exon7;Parent=Dca48081.1
scaffold59	Augustus	exon	61343	61609	.	-	.	ID=Dca48081.1.exon8;Parent=Dca48081.1