Dca48147.1
Annotation
- 2-exons
- f-1
- sp|Q6L3N8_SOLDE#Putative gag-pol polyprotein, identical#Solanum demissum (Wild potato)#ORFNames=SDM1_42t00010#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold5909)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48147.1 |
8 |
293 |
293 |
62.45 |
286 |
56 |
5e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6L3N8_SOLDE |
1000 |
1326 |
1333 |
24.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48147.1 |
12 |
287 |
293 |
39.24 |
276 |
37 |
3e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1073 |
1389 |
1401 |
22.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5909 |
Augustus |
mRNA |
17844 |
18821 |
. |
- |
. |
ID=Dca48147.1;Parent=Dca48147 |
| scaffold5909 |
Augustus |
exon |
17844 |
18232 |
. |
- |
. |
ID=Dca48147.1.exon1;Parent=Dca48147.1 |
| scaffold5909 |
Augustus |
exon |
18329 |
18821 |
. |
- |
. |
ID=Dca48147.1.exon2;Parent=Dca48147.1 |
