Carnation DB

Dca48257.1

Annotation

6-exons
f-1
sp|B9I3R0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_423272#GO:0003993;GO:0046872#2F0P0C
Os09t0506000-04 Similar to Diphosphonucleotide phosphatase 1 precursor.
Repeat List (scaffold5931)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48257.1	47	181	201	44.77	135	67	8e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9I3R0_POPTR	257	388	592	22.29

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48257.1	47	159	201	41.29	113	74	5e-48
Target_name	Start	End	Length	Cov(%)
Os09t0506000-04	294	406	631	17.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5931	Augustus	mRNA	13162	15233	.	-	.	ID=Dca48257.1;Parent=Dca48257
scaffold5931	Augustus	exon	13162	13174	.	-	.	ID=Dca48257.1.exon1;Parent=Dca48257.1
scaffold5931	Augustus	exon	13255	13440	.	-	.	ID=Dca48257.1.exon2;Parent=Dca48257.1
scaffold5931	Augustus	exon	13546	13751	.	-	.	ID=Dca48257.1.exon3;Parent=Dca48257.1
scaffold5931	Augustus	exon	13848	13913	.	-	.	ID=Dca48257.1.exon4;Parent=Dca48257.1
scaffold5931	Augustus	exon	15013	15081	.	-	.	ID=Dca48257.1.exon5;Parent=Dca48257.1
scaffold5931	Augustus	exon	15168	15233	.	-	.	ID=Dca48257.1.exon6;Parent=Dca48257.1