Carnation DB

Dca48287.1

Annotation

15-exons
f-1
sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
sp|Q9SZ87_ARATH#RNA-directed DNA polymerase-like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=F17A8.60#GO:0003723;GO:0003964;GO:0006278#2F1P0C
Repeat List (scaffold594)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48287.1	1	825	1461	19.5	825	32	6e-123
Target_name	Start	End	Length	Cov(%)
sp\|F4NCH8_BETVU	453	1324	1365	63.88

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48287.1	6	393	1461	9.58	388	36	6e-62
Target_name	Start	End	Length	Cov(%)
Os06t0484800-00	365	744	857	44.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold594	Augustus	mRNA	47640	58856	.	+	.	ID=Dca48287.1;Parent=Dca48287
scaffold594	Augustus	exon	47640	48740	.	+	.	ID=Dca48287.1.exon1;Parent=Dca48287.1
scaffold594	Augustus	exon	48931	50290	.	+	.	ID=Dca48287.1.exon2;Parent=Dca48287.1
scaffold594	Augustus	exon	52083	52142	.	+	.	ID=Dca48287.1.exon3;Parent=Dca48287.1
scaffold594	Augustus	exon	52922	52987	.	+	.	ID=Dca48287.1.exon4;Parent=Dca48287.1
scaffold594	Augustus	exon	53105	53161	.	+	.	ID=Dca48287.1.exon5;Parent=Dca48287.1
scaffold594	Augustus	exon	53662	53697	.	+	.	ID=Dca48287.1.exon6;Parent=Dca48287.1
scaffold594	Augustus	exon	53825	53884	.	+	.	ID=Dca48287.1.exon7;Parent=Dca48287.1
scaffold594	Augustus	exon	55285	55499	.	+	.	ID=Dca48287.1.exon8;Parent=Dca48287.1
scaffold594	Augustus	exon	56062	56191	.	+	.	ID=Dca48287.1.exon9;Parent=Dca48287.1
scaffold594	Augustus	exon	56300	56347	.	+	.	ID=Dca48287.1.exon10;Parent=Dca48287.1
scaffold594	Augustus	exon	56773	56829	.	+	.	ID=Dca48287.1.exon11;Parent=Dca48287.1
scaffold594	Augustus	exon	57335	57511	.	+	.	ID=Dca48287.1.exon12;Parent=Dca48287.1
scaffold594	Augustus	exon	57591	57707	.	+	.	ID=Dca48287.1.exon13;Parent=Dca48287.1
scaffold594	Augustus	exon	57852	58555	.	+	.	ID=Dca48287.1.exon14;Parent=Dca48287.1
scaffold594	Augustus	exon	58659	58856	.	+	.	ID=Dca48287.1.exon15;Parent=Dca48287.1