Dca48296.1
Annotation
- 3-exons
- f-1
- sp|B9HUD6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_814136#GO:0003723;GO:0003735;GO:0006412#2F1P0C
- AT5G09500.1 | Symbols: | Ribosomal protein S19 family protein | chr5:2954044-2954850 REVERSE LENGTH=150
- Repeat List (scaffold594)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48296.1 |
7 |
154 |
154 |
81.81 |
148 |
86 |
1e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HUD6_POPTR |
5 |
152 |
152 |
97.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48296.1 |
6 |
154 |
154 |
79.22 |
149 |
82 |
7e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G09500.1 |
2 |
150 |
150 |
99.33 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold594 |
Augustus |
mRNA |
113291 |
114726 |
. |
+ |
. |
ID=Dca48296.1;Parent=Dca48296 |
| scaffold594 |
Augustus |
exon |
113291 |
113448 |
. |
+ |
. |
ID=Dca48296.1.exon1;Parent=Dca48296.1 |
| scaffold594 |
Augus-PASA |
exon |
113589 |
113646 |
. |
+ |
. |
ID=Dca48296.1.exon2;Parent=Dca48296.1 |
| scaffold594 |
Augus-PASA |
exon |
114478 |
114726 |
. |
+ |
. |
ID=Dca48296.1.exon3;Parent=Dca48296.1 |
