Carnation DB

Dca48402.1

Annotation

8-exons
f-1
sp|D7TRB8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0215g00030#GO:0006914;GO:0015031;GO:0006508#0F3P0C
AT2G44140.1 | Symbols: | Peptidase family C54 protein | chr2:18255106-18257165 REVERSE LENGTH=467
Repeat List (scaffold597)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48402.1	28	484	484	59.91	457	61	8e-157
Target_name	Start	End	Length	Cov(%)
sp\|D7TRB8_VITVI	12	486	486	97.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48402.1	1	454	484	51.85	454	55	1e-141
Target_name	Start	End	Length	Cov(%)
AT2G44140.1	1	450	467	96.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold597	Augustus	mRNA	155324	159543	.	+	.	ID=Dca48402.1;Parent=Dca48402
scaffold597	Augustus	exon	155324	155798	.	+	.	ID=Dca48402.1.exon1;Parent=Dca48402.1
scaffold597	Augus-PASA	exon	156243	156328	.	+	.	ID=Dca48402.1.exon2;Parent=Dca48402.1
scaffold597	Augus-PASA	exon	156403	156453	.	+	.	ID=Dca48402.1.exon3;Parent=Dca48402.1
scaffold597	Augustus	exon	156535	156905	.	+	.	ID=Dca48402.1.exon4;Parent=Dca48402.1
scaffold597	Augus-PASA	exon	157897	158035	.	+	.	ID=Dca48402.1.exon5;Parent=Dca48402.1
scaffold597	Augus-PASA	exon	158635	158690	.	+	.	ID=Dca48402.1.exon6;Parent=Dca48402.1
scaffold597	Augus-PASA	exon	158776	158846	.	+	.	ID=Dca48402.1.exon7;Parent=Dca48402.1
scaffold597	Augus-PASA	exon	159338	159543	.	+	.	ID=Dca48402.1.exon8;Parent=Dca48402.1