Carnation DB

Dca48433.1

Annotation

9-exons
f-1
sp|B9I4D6_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_570500#GO:0005634;GO:0003712#1F0P1C
AT5G62090.1 | Symbols: SLK2 | SEUSS-like 2 | chr5:24935221-24938540 REVERSE LENGTH=816
Repeat List (scaffold5978)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48433.1	1	836	836	66.14	836	63	0
Target_name	Start	End	Length	Cov(%)
sp\|B9I4D6_POPTR	6	873	873	99.42

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48433.1	300	704	836	30.74	405	61	3e-143
Target_name	Start	End	Length	Cov(%)
AT5G62090.1	291	709	816	51.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold5978	Augustus	mRNA	13206	17773	.	+	.	ID=Dca48433.1;Parent=Dca48433
scaffold5978	Augustus	exon	13206	14156	.	+	.	ID=Dca48433.1.exon1;Parent=Dca48433.1
scaffold5978	Augustus	exon	14708	14839	.	+	.	ID=Dca48433.1.exon2;Parent=Dca48433.1
scaffold5978	Augustus	exon	14932	14980	.	+	.	ID=Dca48433.1.exon3;Parent=Dca48433.1
scaffold5978	Augustus	exon	15806	16020	.	+	.	ID=Dca48433.1.exon4;Parent=Dca48433.1
scaffold5978	Augustus	exon	16117	16185	.	+	.	ID=Dca48433.1.exon5;Parent=Dca48433.1
scaffold5978	Augustus	exon	16349	16449	.	+	.	ID=Dca48433.1.exon6;Parent=Dca48433.1
scaffold5978	Augustus	exon	16572	16665	.	+	.	ID=Dca48433.1.exon7;Parent=Dca48433.1
scaffold5978	Augustus	exon	16750	16819	.	+	.	ID=Dca48433.1.exon8;Parent=Dca48433.1
scaffold5978	Augustus	exon	16944	17773	.	+	.	ID=Dca48433.1.exon9;Parent=Dca48433.1