Dca4848.1
Annotation
- 3-exons
- f-1
- sp|Q5W6A7_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0051L16.7#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold11831)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4848.1 |
3 |
581 |
595 |
51.09 |
579 |
49 |
1e-163
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5W6A7_ORYSJ |
607 |
1201 |
1594 |
37.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4848.1 |
1 |
433 |
595 |
27.39 |
433 |
35 |
8e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
128 |
602 |
707 |
67.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11831 |
Augustus |
mRNA |
12302 |
14321 |
. |
- |
. |
ID=Dca4848.1;Parent=Dca4848 |
| scaffold11831 |
Augustus |
exon |
12302 |
12784 |
. |
- |
. |
ID=Dca4848.1.exon1;Parent=Dca4848.1 |
| scaffold11831 |
Augustus |
exon |
12920 |
13686 |
. |
- |
. |
ID=Dca4848.1.exon2;Parent=Dca4848.1 |
| scaffold11831 |
Augustus |
exon |
13784 |
14321 |
. |
- |
. |
ID=Dca4848.1.exon3;Parent=Dca4848.1 |
