Dca48514.1
Annotation
- 3-exons
- f-1
- sp|H2KWP6_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g25734#unknown#0F0P0C
- Repeat List (scaffold5998)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48514.1 |
1 |
97 |
110 |
30 |
97 |
35 |
1e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|H2KWP6_ORYSJ |
79 |
158 |
932 |
8.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold5998 |
Augustus |
mRNA |
17923 |
18663 |
. |
- |
. |
ID=Dca48514.1;Parent=Dca48514 |
| scaffold5998 |
Augustus |
exon |
17923 |
17939 |
. |
- |
. |
ID=Dca48514.1.exon1;Parent=Dca48514.1 |
| scaffold5998 |
Augustus |
exon |
18033 |
18186 |
. |
- |
. |
ID=Dca48514.1.exon2;Parent=Dca48514.1 |
| scaffold5998 |
Augustus |
exon |
18502 |
18663 |
. |
- |
. |
ID=Dca48514.1.exon3;Parent=Dca48514.1 |
