Carnation DB

Dca48571.1

Annotation

9-exons
f-1
sp|E0CNU7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g08180#GO:0016788;GO:0006397#1F1P0C
sp|B9RNS1_RICCO#RNA lariat debranching enzyme, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0920340#GO:0020037;GO:0016788;GO:0004601;GO:0006397;GO:0006979#3F2P0C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48571.1	1	371	417	65.46	371	74	1e-168
Target_name	Start	End	Length	Cov(%)
sp\|E0CNU7_VITVI	1	373	407	91.64

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48571.1	1	382	417	63.3	382	70	6e-157
Target_name	Start	End	Length	Cov(%)
AT4G31770.1	1	382	418	91.38

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augustus	mRNA	464891	470098	.	-	.	ID=Dca48571.1;Parent=Dca48571
scaffold6	Augustus	exon	464891	464994	.	-	.	ID=Dca48571.1.exon1;Parent=Dca48571.1
scaffold6	Augustus	exon	465356	465472	.	-	.	ID=Dca48571.1.exon2;Parent=Dca48571.1
scaffold6	Augustus	exon	465913	466049	.	-	.	ID=Dca48571.1.exon3;Parent=Dca48571.1
scaffold6	Augustus	exon	466130	466245	.	-	.	ID=Dca48571.1.exon4;Parent=Dca48571.1
scaffold6	Augustus	exon	466333	466515	.	-	.	ID=Dca48571.1.exon5;Parent=Dca48571.1
scaffold6	Augustus	exon	467704	467897	.	-	.	ID=Dca48571.1.exon6;Parent=Dca48571.1
scaffold6	Augus-PASA	exon	468085	468206	.	-	.	ID=Dca48571.1.exon7;Parent=Dca48571.1
scaffold6	Augus-PASA	exon	468778	468935	.	-	.	ID=Dca48571.1.exon8;Parent=Dca48571.1
scaffold6	Augus-PASA	exon	469976	470098	.	-	.	ID=Dca48571.1.exon9;Parent=Dca48571.1