Dca4858.1
Annotation
- 3-exons
- f-1
- sp|E5GCP6_CUCME#Ty3-gypsy retrotransposon protein#Cucumis melo subsp melo#unknown#unknown#0F0P0C
- Repeat List (scaffold1184)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4858.1 |
496 |
876 |
1047 |
19.29 |
381 |
47 |
4e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GCP6_CUCME |
84 |
517 |
517 |
83.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4858.1 |
46 |
191 |
1047 |
6.2 |
146 |
42 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G24255.1 |
3 |
157 |
746 |
20.77 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1184 |
Augustus |
mRNA |
25530 |
28900 |
. |
+ |
. |
ID=Dca4858.1;Parent=Dca4858 |
| scaffold1184 |
Augustus |
exon |
25530 |
26808 |
. |
+ |
. |
ID=Dca4858.1.exon1;Parent=Dca4858.1 |
| scaffold1184 |
Augustus |
exon |
26901 |
28149 |
. |
+ |
. |
ID=Dca4858.1.exon2;Parent=Dca4858.1 |
| scaffold1184 |
Augustus |
exon |
28285 |
28900 |
. |
+ |
. |
ID=Dca4858.1.exon3;Parent=Dca4858.1 |
