Carnation DB

Dca48622.1

Annotation

7-exons
f-1
sp|D7U469_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0044g00110#GO:0003677#1F0P0C
sp|Q40094_IPONI#High mobility group protein 2 HMG2#Ipomoea nil (Japanese morning glory) (Pharbitis nil)#unknown#GO:0003677#1F0P0C
Repeat List (scaffold6)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48622.1	1	129	145	65.51	129	70	2e-43
Target_name	Start	End	Length	Cov(%)
sp\|D7U469_VITVI	1	137	154	88.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48622.1	5	140	145	57.93	136	62	4e-38
Target_name	Start	End	Length	Cov(%)
Os09t0551600-01	2	127	128	98.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6	Augus-PASA	mRNA	794825	797067	.	-	.	ID=Dca48622.1;Parent=Dca48622
scaffold6	Augus-PASA	exon	794825	794845	.	-	.	ID=Dca48622.1.exon1;Parent=Dca48622.1
scaffold6	Augus-PASA	exon	794941	795030	.	-	.	ID=Dca48622.1.exon2;Parent=Dca48622.1
scaffold6	Augus-PASA	exon	795129	795209	.	-	.	ID=Dca48622.1.exon3;Parent=Dca48622.1
scaffold6	Augus-PASA	exon	795305	795349	.	-	.	ID=Dca48622.1.exon4;Parent=Dca48622.1
scaffold6	Augus-PASA	exon	795469	795526	.	-	.	ID=Dca48622.1.exon5;Parent=Dca48622.1
scaffold6	Augus-PASA	exon	795638	795733	.	-	.	ID=Dca48622.1.exon6;Parent=Dca48622.1
scaffold6	Augustus	exon	797021	797067	.	-	.	ID=Dca48622.1.exon7;Parent=Dca48622.1