Carnation DB

Dca48724.1

Annotation

5-exons
f-1
sp|F6HF66_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g01480#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P1C
sp|G7JE11_MEDTR#Chromodomain-helicase-DNA-binding protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_4g096930#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0008270#4F0P1C
Repeat List (scaffold6019)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48724.1	1	462	533	30.58	462	35	1e-44
Target_name	Start	End	Length	Cov(%)
sp\|F6HF66_VITVI	1	412	2157	19.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca48724.1	1	180	533	12.75	180	38	2e-25
Target_name	Start	End	Length	Cov(%)
AT5G44800.1	1	174	2223	7.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6019	Augustus	mRNA	15731	20300	.	+	.	ID=Dca48724.1;Parent=Dca48724
scaffold6019	Augustus	exon	15731	15964	.	+	.	ID=Dca48724.1.exon1;Parent=Dca48724.1
scaffold6019	Augustus	exon	17727	17828	.	+	.	ID=Dca48724.1.exon2;Parent=Dca48724.1
scaffold6019	Augustus	exon	17945	18730	.	+	.	ID=Dca48724.1.exon3;Parent=Dca48724.1
scaffold6019	Augustus	exon	19712	19792	.	+	.	ID=Dca48724.1.exon4;Parent=Dca48724.1
scaffold6019	Augustus	exon	19902	20300	.	+	.	ID=Dca48724.1.exon5;Parent=Dca48724.1