Dca48725.1
Annotation
- 4-exons
- f-1
- sp|B9N3S4_POPTR#Chromatin remodeling complex subunit#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CHR906#GO:0005634;GO:0005524;GO:0003677;GO:0004386;GO:0008270;GO:0006355#4F1P1C
- Repeat List (scaffold6019)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48725.1 |
18 |
301 |
311 |
32.79 |
284 |
34 |
5e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N3S4_POPTR |
1323 |
1621 |
2332 |
12.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48725.1 |
20 |
296 |
311 |
29.9 |
277 |
33 |
7e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G44800.1 |
1264 |
1514 |
2223 |
11.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6019 |
Augustus |
mRNA |
24873 |
29126 |
. |
+ |
. |
ID=Dca48725.1;Parent=Dca48725 |
| scaffold6019 |
Augustus |
exon |
24873 |
25057 |
. |
+ |
. |
ID=Dca48725.1.exon1;Parent=Dca48725.1 |
| scaffold6019 |
Augustus |
exon |
25654 |
25774 |
. |
+ |
. |
ID=Dca48725.1.exon2;Parent=Dca48725.1 |
| scaffold6019 |
Augustus |
exon |
27348 |
27433 |
. |
+ |
. |
ID=Dca48725.1.exon3;Parent=Dca48725.1 |
| scaffold6019 |
Augustus |
exon |
28583 |
29126 |
. |
+ |
. |
ID=Dca48725.1.exon4;Parent=Dca48725.1 |
