Dca48855.1
Annotation
- 3-exons
- f-1
- sp|A9P933_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005488#1F0P0C
- AT4G11260.1 | Symbols: ATSGT1B, ETA3, RPR1, EDM1, SGT1B | phosphatase-related | chr4:6851515-6853719 REVERSE LENGTH=358
- Repeat List (scaffold6051)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48855.1 |
5 |
122 |
122 |
51.63 |
118 |
54 |
2e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9P933_POPTR |
1 |
118 |
358 |
32.96 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca48855.1 |
7 |
122 |
122 |
41.8 |
116 |
44 |
2e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G11260.1 |
4 |
119 |
358 |
32.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6051 |
Augustus |
mRNA |
386 |
1106 |
. |
- |
. |
ID=Dca48855.1;Parent=Dca48855 |
| scaffold6051 |
Augustus |
exon |
386 |
513 |
. |
- |
. |
ID=Dca48855.1.exon1;Parent=Dca48855.1 |
| scaffold6051 |
Augustus |
exon |
588 |
657 |
. |
- |
. |
ID=Dca48855.1.exon2;Parent=Dca48855.1 |
| scaffold6051 |
Augustus |
exon |
938 |
1106 |
. |
- |
. |
ID=Dca48855.1.exon3;Parent=Dca48855.1 |
