Dca49129.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold6105)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49129.1 |
6 |
439 |
457 |
48.57 |
434 |
47 |
1e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
222 |
680 |
1501 |
30.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49129.1 |
96 |
432 |
457 |
24.07 |
337 |
32 |
5e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
21 |
361 |
707 |
48.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6105 |
Augustus |
mRNA |
17577 |
21370 |
. |
- |
. |
ID=Dca49129.1;Parent=Dca49129 |
| scaffold6105 |
Augustus |
exon |
17577 |
17658 |
. |
- |
. |
ID=Dca49129.1.exon1;Parent=Dca49129.1 |
| scaffold6105 |
Augustus |
exon |
20079 |
21370 |
. |
- |
. |
ID=Dca49129.1.exon2;Parent=Dca49129.1 |
