Carnation DB

Dca49166.1

Annotation

22-exons
f-1
sp|B9HIQ7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_803495#GO:0005488#1F0P0C
AT3G06670.2 | Symbols: | binding | chr3:2105908-2113136 REVERSE LENGTH=886
Repeat List (scaffold611)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49166.1	32	258	263	53.61	227	56	2e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9HWX8_POPTR	517	768	861	29.26

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49166.1	11	243	263	45.62	233	44	1e-48
Target_name	Start	End	Length	Cov(%)
AT3G06670.2	518	781	886	29.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold611	Augustus	mRNA	230902	238939	.	+	.	ID=Dca49166.1;Parent=Dca49166
scaffold611	Augustus	exon	230902	231007	.	+	.	ID=Dca49166.1.exon1;Parent=Dca49166.1
scaffold611	Augustus	exon	231099	231241	.	+	.	ID=Dca49166.1.exon2;Parent=Dca49166.1
scaffold611	Augustus	exon	232245	232344	.	+	.	ID=Dca49166.1.exon3;Parent=Dca49166.1
scaffold611	Augustus	exon	232436	232523	.	+	.	ID=Dca49166.1.exon4;Parent=Dca49166.1
scaffold611	Augustus	exon	233002	233051	.	+	.	ID=Dca49166.1.exon5;Parent=Dca49166.1
scaffold611	Augustus	exon	233344	233423	.	+	.	ID=Dca49166.1.exon6;Parent=Dca49166.1
scaffold611	Augustus	exon	233604	233663	.	+	.	ID=Dca49166.1.exon7;Parent=Dca49166.1
scaffold611	Augustus	exon	234269	234368	.	+	.	ID=Dca49166.1.exon8;Parent=Dca49166.1
scaffold611	Augustus	exon	234451	234528	.	+	.	ID=Dca49166.1.exon9;Parent=Dca49166.1
scaffold611	Augustus	exon	234706	234770	.	+	.	ID=Dca49166.1.exon10;Parent=Dca49166.1
scaffold611	Augustus	exon	234918	234986	.	+	.	ID=Dca49166.1.exon11;Parent=Dca49166.1
scaffold611	Augustus	exon	235065	235142	.	+	.	ID=Dca49166.1.exon12;Parent=Dca49166.1
scaffold611	Augustus	exon	235221	235316	.	+	.	ID=Dca49166.1.exon13;Parent=Dca49166.1
scaffold611	Augustus	exon	235443	235528	.	+	.	ID=Dca49166.1.exon14;Parent=Dca49166.1
scaffold611	Augustus	exon	235676	235753	.	+	.	ID=Dca49166.1.exon15;Parent=Dca49166.1
scaffold611	Augustus	exon	235977	236070	.	+	.	ID=Dca49166.1.exon16;Parent=Dca49166.1
scaffold611	Augustus	exon	236561	236619	.	+	.	ID=Dca49166.1.exon17;Parent=Dca49166.1
scaffold611	Augustus	exon	237658	237772	.	+	.	ID=Dca49166.1.exon18;Parent=Dca49166.1
scaffold611	Augustus	exon	238103	238234	.	+	.	ID=Dca49166.1.exon19;Parent=Dca49166.1
scaffold611	Augustus	exon	238334	238441	.	+	.	ID=Dca49166.1.exon20;Parent=Dca49166.1
scaffold611	Augustus	exon	238513	238646	.	+	.	ID=Dca49166.1.exon21;Parent=Dca49166.1
scaffold611	Augustus	exon	238732	238939	.	+	.	ID=Dca49166.1.exon22;Parent=Dca49166.1