Carnation DB

Dca49327.1

Annotation

8-exons
f-1
sp|B9IH00_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_254628#GO:0016021;GO:0005524;GO:0004674#2F0P1C
AT1G79620.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr1:29957633-29962174 REVERSE LENGTH=971
Repeat List (scaffold6151)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49327.1	98	242	295	26.44	145	41	5e-29
Target_name	Start	End	Length	Cov(%)
sp\|B9IH00_POPTR	140	318	946	18.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49327.1	98	201	295	22.71	104	45	7e-28
Target_name	Start	End	Length	Cov(%)
AT1G79620.1	176	326	971	15.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6151	Augustus	mRNA	14803	17635	.	-	.	ID=Dca49327.1;Parent=Dca49327
scaffold6151	Augustus	exon	14803	14944	.	-	.	ID=Dca49327.1.exon1;Parent=Dca49327.1
scaffold6151	Augustus	exon	15052	15181	.	-	.	ID=Dca49327.1.exon2;Parent=Dca49327.1
scaffold6151	Augustus	exon	16174	16262	.	-	.	ID=Dca49327.1.exon3;Parent=Dca49327.1
scaffold6151	Augustus	exon	16383	16454	.	-	.	ID=Dca49327.1.exon4;Parent=Dca49327.1
scaffold6151	Augustus	exon	16545	16619	.	-	.	ID=Dca49327.1.exon5;Parent=Dca49327.1
scaffold6151	Augustus	exon	16707	16785	.	-	.	ID=Dca49327.1.exon6;Parent=Dca49327.1
scaffold6151	Augustus	exon	17246	17321	.	-	.	ID=Dca49327.1.exon7;Parent=Dca49327.1
scaffold6151	Augustus	exon	17411	17635	.	-	.	ID=Dca49327.1.exon8;Parent=Dca49327.1