Dca49350.1
Annotation
- 4-exons
- f-1
- sp|D5ABW9_PICSI#Putative uncharacterized protein#Picea sitchensis (Sitka spruce) (Pinus sitchensis)#unknown#GO:0005634;GO:0000166;GO:0003723;GO:0008270#3F0P1C
- sp|B9SN77_RICCO#U2 snrnp auxiliary factor, small subunit, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1186310#GO:0005634;GO:0000166;GO:0003723;GO:0008270#3F0P1C
- Repeat List (scaffold616)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49350.1 |
1 |
291 |
299 |
76.58 |
291 |
71 |
2e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D5ABW9_PICSI |
1 |
323 |
334 |
96.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49350.1 |
1 |
281 |
299 |
64.88 |
281 |
66 |
1e-98
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G42820.2 |
1 |
282 |
283 |
99.64 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold616 |
Augus-PASA |
mRNA |
98409 |
100977 |
. |
+ |
. |
ID=Dca49350.1;Parent=Dca49350 |
| scaffold616 |
Augus-PASA |
exon |
98409 |
98645 |
. |
+ |
. |
ID=Dca49350.1.exon1;Parent=Dca49350.1 |
| scaffold616 |
Augus-PASA |
exon |
100114 |
100200 |
. |
+ |
. |
ID=Dca49350.1.exon2;Parent=Dca49350.1 |
| scaffold616 |
Augus-PASA |
exon |
100313 |
100521 |
. |
+ |
. |
ID=Dca49350.1.exon3;Parent=Dca49350.1 |
| scaffold616 |
Augus-PASA |
exon |
100611 |
100977 |
. |
+ |
. |
ID=Dca49350.1.exon4;Parent=Dca49350.1 |
