Carnation DB

Dca49392.1

Annotation

6-exons
f-1
sp|B9T1E7_RICCO#Mitochondrial oxoglutarate/malate carrier protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1361330#GO:0016021;GO:0006810#0F1P1C
Repeat List (scaffold617)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49392.1	10	298	298	86.57	289	90	3e-153
Target_name	Start	End	Length	Cov(%)
sp\|B9T1E7_RICCO	12	300	300	96.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49392.1	1	298	298	83.89	298	84	1e-149
Target_name	Start	End	Length	Cov(%)
AT5G19760.1	1	298	298	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold617	Augus-PASA	mRNA	65821	67901	.	+	.	ID=Dca49392.1;Parent=Dca49392
scaffold617	Augus-PASA	exon	65821	65937	.	+	.	ID=Dca49392.1.exon1;Parent=Dca49392.1
scaffold617	Augus-PASA	exon	66219	66302	.	+	.	ID=Dca49392.1.exon2;Parent=Dca49392.1
scaffold617	Augus-PASA	exon	66517	66578	.	+	.	ID=Dca49392.1.exon3;Parent=Dca49392.1
scaffold617	Augus-PASA	exon	66947	67308	.	+	.	ID=Dca49392.1.exon4;Parent=Dca49392.1
scaffold617	Augus-PASA	exon	67450	67664	.	+	.	ID=Dca49392.1.exon5;Parent=Dca49392.1
scaffold617	Augus-PASA	exon	67845	67901	.	+	.	ID=Dca49392.1.exon6;Parent=Dca49392.1