Dca49408.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold6174)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49408.1 |
1 |
388 |
464 |
53.23 |
388 |
62 |
5e-132
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
380 |
750 |
1717 |
21.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49408.1 |
140 |
232 |
464 |
7.54 |
93 |
38 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6174 |
Augustus |
mRNA |
18780 |
20238 |
. |
+ |
. |
ID=Dca49408.1;Parent=Dca49408 |
| scaffold6174 |
Augustus |
exon |
18780 |
18983 |
. |
+ |
. |
ID=Dca49408.1.exon1;Parent=Dca49408.1 |
| scaffold6174 |
Augustus |
exon |
19048 |
20238 |
. |
+ |
. |
ID=Dca49408.1.exon2;Parent=Dca49408.1 |
