Dca49420.1
Annotation
- 3-exons
- f-1
- sp|A5AE14_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_036538#GO:0003676;GO:0008270#2F0P0C
- sp|Q9SLF0_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g16670#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold6178)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49420.1 |
1 |
394 |
460 |
33.91 |
394 |
34 |
2e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AE14_VITVI |
146 |
599 |
1157 |
39.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49420.1 |
222 |
360 |
460 |
10.21 |
139 |
34 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0909600-01 |
181 |
318 |
332 |
41.56 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6178 |
Augustus |
mRNA |
13572 |
15602 |
. |
- |
. |
ID=Dca49420.1;Parent=Dca49420 |
| scaffold6178 |
Augustus |
exon |
13572 |
13873 |
. |
- |
. |
ID=Dca49420.1.exon1;Parent=Dca49420.1 |
| scaffold6178 |
Augustus |
exon |
14330 |
14747 |
. |
- |
. |
ID=Dca49420.1.exon2;Parent=Dca49420.1 |
| scaffold6178 |
Augustus |
exon |
14940 |
15602 |
. |
- |
. |
ID=Dca49420.1.exon3;Parent=Dca49420.1 |
