Carnation DB

Dca49616.1

Annotation

5-exons
f-1
sp|B9SCS0_RICCO#Bile acid:sodium symporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1280430#unknown#0F0P0C
Repeat List (scaffold6210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49616.1	105	186	190	32.1	82	75	4e-26
Target_name	Start	End	Length	Cov(%)
sp\|B9SCS0_RICCO	187	268	409	20.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49616.1	105	187	190	26.84	83	62	2e-21
Target_name	Start	End	Length	Cov(%)
Os02t0531200-01	185	267	424	19.57

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6210	Augustus	mRNA	8831	11917	.	+	.	ID=Dca49616.1;Parent=Dca49616
scaffold6210	Augustus	exon	8831	9037	.	+	.	ID=Dca49616.1.exon1;Parent=Dca49616.1
scaffold6210	Augustus	exon	9604	9709	.	+	.	ID=Dca49616.1.exon2;Parent=Dca49616.1
scaffold6210	Augustus	exon	11410	11468	.	+	.	ID=Dca49616.1.exon3;Parent=Dca49616.1
scaffold6210	Augustus	exon	11553	11621	.	+	.	ID=Dca49616.1.exon4;Parent=Dca49616.1
scaffold6210	Augustus	exon	11786	11917	.	+	.	ID=Dca49616.1.exon5;Parent=Dca49616.1