Dca49637.1
Annotation
- 4-exons
- f-1
- sp|A5BE46_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_025855#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os08t0125300-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold6219)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49637.1 |
1 |
704 |
704 |
70.73 |
704 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BE46_VITVI |
5 |
845 |
1356 |
62.02 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca49637.1 |
237 |
607 |
704 |
18.03 |
371 |
34 |
5e-55
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
389 |
746 |
1428 |
25.07 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6219 |
Augustus |
mRNA |
4436 |
7000 |
. |
+ |
. |
ID=Dca49637.1;Parent=Dca49637 |
| scaffold6219 |
Augustus |
exon |
4436 |
4775 |
. |
+ |
. |
ID=Dca49637.1.exon1;Parent=Dca49637.1 |
| scaffold6219 |
Augustus |
exon |
4960 |
5247 |
. |
+ |
. |
ID=Dca49637.1.exon2;Parent=Dca49637.1 |
| scaffold6219 |
Augustus |
exon |
5316 |
6502 |
. |
+ |
. |
ID=Dca49637.1.exon3;Parent=Dca49637.1 |
| scaffold6219 |
Augustus |
exon |
6701 |
7000 |
. |
+ |
. |
ID=Dca49637.1.exon4;Parent=Dca49637.1 |
