Carnation DB

Dca4970.1

Annotation

6-exons
f-1
sp|B9HLA5_POPTR#Multidrug resistance protein ABC transporter family#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_420503#GO:0016021;GO:0005524;GO:0042626#2F0P1C
Repeat List (scaffold119)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4970.1	2	726	786	51.9	725	51	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HLA5_POPTR	98	902	1361	59.14

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4970.1	82	726	786	43.25	645	48	0
Target_name	Start	End	Length	Cov(%)
Os01t0902100-00	1	700	1032	67.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold119	Augustus	mRNA	70861	74224	.	-	.	ID=Dca4970.1;Parent=Dca4970
scaffold119	Augustus	exon	70861	71043	.	-	.	ID=Dca4970.1.exon1;Parent=Dca4970.1
scaffold119	Augustus	exon	71344	71936	.	-	.	ID=Dca4970.1.exon2;Parent=Dca4970.1
scaffold119	Augustus	exon	72094	72180	.	-	.	ID=Dca4970.1.exon3;Parent=Dca4970.1
scaffold119	Augustus	exon	72257	73302	.	-	.	ID=Dca4970.1.exon4;Parent=Dca4970.1
scaffold119	Augustus	exon	73453	73684	.	-	.	ID=Dca4970.1.exon5;Parent=Dca4970.1
scaffold119	Augustus	exon	74005	74224	.	-	.	ID=Dca4970.1.exon6;Parent=Dca4970.1