Carnation DB

Dca49987.1

Annotation

8-exons
f-1
sp|B9GFJ5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_829809#GO:0030870;GO:0005524;GO:0004518;GO:0008270#3F0P1C
sp|B9S9Y8_RICCO#DNA repair protein RAD50, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0523620#GO:0030870;GO:0005524;GO:0004518;GO:0008270;GO:0006281#3F1P1C
Repeat List (scaffold6300)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49987.1	1	425	432	71.75	425	72	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GFJ5_POPTR	1	431	1316	32.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca49987.1	1	416	432	69.21	416	72	5e-176
Target_name	Start	End	Length	Cov(%)
AT2G31970.1	1	416	1316	31.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6300	Augustus	mRNA	14572	17487	.	+	.	ID=Dca49987.1;Parent=Dca49987
scaffold6300	Augustus	exon	14572	14694	.	+	.	ID=Dca49987.1.exon1;Parent=Dca49987.1
scaffold6300	Augustus	exon	14915	15001	.	+	.	ID=Dca49987.1.exon2;Parent=Dca49987.1
scaffold6300	Augustus	exon	15104	15271	.	+	.	ID=Dca49987.1.exon3;Parent=Dca49987.1
scaffold6300	Augustus	exon	15940	16115	.	+	.	ID=Dca49987.1.exon4;Parent=Dca49987.1
scaffold6300	Augustus	exon	16329	16443	.	+	.	ID=Dca49987.1.exon5;Parent=Dca49987.1
scaffold6300	Augustus	exon	16627	16855	.	+	.	ID=Dca49987.1.exon6;Parent=Dca49987.1
scaffold6300	Augustus	exon	17005	17183	.	+	.	ID=Dca49987.1.exon7;Parent=Dca49987.1
scaffold6300	Augustus	exon	17266	17487	.	+	.	ID=Dca49987.1.exon8;Parent=Dca49987.1