Dca5.1
Annotation
- 5-exons
- f-1
- sp|B9HAQ1_POPTR#Autoinhibited H+ ATPase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_762873#GO:0016021;GO:0005524;GO:0015662;GO:0046872;GO:0006754;GO:0006812#3F2P1C
- Repeat List (scaffold1)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5.1 |
100 |
234 |
238 |
25.21 |
135 |
43 |
3e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HAQ1_POPTR |
296 |
436 |
949 |
14.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5.1 |
113 |
193 |
238 |
20.16 |
81 |
60 |
3e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0191200-02 |
165 |
245 |
812 |
9.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1 |
Augustus |
mRNA |
56536 |
59027 |
. |
- |
. |
ID=Dca5.1;Parent=Dca5 |
| scaffold1 |
Augustus |
exon |
56536 |
56673 |
. |
- |
. |
ID=Dca5.1.exon1;Parent=Dca5.1 |
| scaffold1 |
Augustus |
exon |
56905 |
57024 |
. |
- |
. |
ID=Dca5.1.exon2;Parent=Dca5.1 |
| scaffold1 |
Augustus |
exon |
57113 |
57235 |
. |
- |
. |
ID=Dca5.1.exon3;Parent=Dca5.1 |
| scaffold1 |
Augustus |
exon |
58252 |
58410 |
. |
- |
. |
ID=Dca5.1.exon4;Parent=Dca5.1 |
| scaffold1 |
Augustus |
exon |
58851 |
59027 |
. |
- |
. |
ID=Dca5.1.exon5;Parent=Dca5.1 |
