Carnation DB

Dca50007.1

Annotation

7-exons
f-1
sp|B9IFS4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_576764#GO:0005529;GO:0016740;GO:0005975#2F1P0C
AT5G03770.1 | Symbols: KDTA | KDO transferase A | chr5:995191-997622 FORWARD LENGTH=447
Repeat List (scaffold6308)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50007.1	106	300	300	36	195	42	3e-45
Target_name	Start	End	Length	Cov(%)
sp\|B9IFS4_POPTR	114	370	446	57.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50007.1	106	158	300	12.33	53	70	6e-15
Target_name	Start	End	Length	Cov(%)
AT5G03770.1	110	162	447	11.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6308	Augustus	mRNA	10233	14105	.	-	.	ID=Dca50007.1;Parent=Dca50007
scaffold6308	Augustus	exon	10233	10258	.	-	.	ID=Dca50007.1.exon1;Parent=Dca50007.1
scaffold6308	Augustus	exon	10461	10580	.	-	.	ID=Dca50007.1.exon2;Parent=Dca50007.1
scaffold6308	Augustus	exon	11500	11590	.	-	.	ID=Dca50007.1.exon3;Parent=Dca50007.1
scaffold6308	Augustus	exon	11928	12152	.	-	.	ID=Dca50007.1.exon4;Parent=Dca50007.1
scaffold6308	Augustus	exon	12359	12481	.	-	.	ID=Dca50007.1.exon5;Parent=Dca50007.1
scaffold6308	Augustus	exon	13315	13470	.	-	.	ID=Dca50007.1.exon6;Parent=Dca50007.1
scaffold6308	Augustus	exon	13944	14105	.	-	.	ID=Dca50007.1.exon7;Parent=Dca50007.1