Carnation DB

Dca50018.1

Annotation

12-exons
f-1
sp|B9GTA1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_552617#GO:0005737;GO:0005524;GO:0004827;GO:0006433#2F1P1C
AT3G62120.1 | Symbols: | Class II aaRS and biotin synthetases superfamily protein | chr3:23001227-23003849 REVERSE LENGTH=530
Repeat List (scaffold631)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50018.1	17	511	511	81.6	495	85	0
Target_name	Start	End	Length	Cov(%)
sp\|B9GTA1_POPTR	4	498	498	99.39

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca50018.1	15	511	511	80.62	497	83	0
Target_name	Start	End	Length	Cov(%)
AT3G62120.1	35	530	530	93.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold631	Augustus	mRNA	46861	50622	.	+	.	ID=Dca50018.1;Parent=Dca50018
scaffold631	Augustus	exon	46861	46906	.	+	.	ID=Dca50018.1.exon1;Parent=Dca50018.1
scaffold631	Augustus	exon	47018	47103	.	+	.	ID=Dca50018.1.exon2;Parent=Dca50018.1
scaffold631	Augustus	exon	47406	47498	.	+	.	ID=Dca50018.1.exon3;Parent=Dca50018.1
scaffold631	Augustus	exon	48074	48190	.	+	.	ID=Dca50018.1.exon4;Parent=Dca50018.1
scaffold631	Augustus	exon	48334	48521	.	+	.	ID=Dca50018.1.exon5;Parent=Dca50018.1
scaffold631	Augus-PASA	exon	48809	48875	.	+	.	ID=Dca50018.1.exon6;Parent=Dca50018.1
scaffold631	Augus-PASA	exon	49170	49292	.	+	.	ID=Dca50018.1.exon7;Parent=Dca50018.1
scaffold631	Augus-PASA	exon	49396	49548	.	+	.	ID=Dca50018.1.exon8;Parent=Dca50018.1
scaffold631	Augus-PASA	exon	49628	49912	.	+	.	ID=Dca50018.1.exon9;Parent=Dca50018.1
scaffold631	Augus-PASA	exon	49999	50217	.	+	.	ID=Dca50018.1.exon10;Parent=Dca50018.1
scaffold631	Augus-PASA	exon	50350	50443	.	+	.	ID=Dca50018.1.exon11;Parent=Dca50018.1
scaffold631	Augus-PASA	exon	50558	50622	.	+	.	ID=Dca50018.1.exon12;Parent=Dca50018.1