Dca50089.1
Annotation
- 2-exons
- f-1
- sp|Q9LVQ2_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold633)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50089.1 |
67 |
266 |
271 |
27.67 |
200 |
37 |
2e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LVQ2_ARATH |
58 |
262 |
1491 |
13.74 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca50089.1 |
62 |
248 |
271 |
24.35 |
187 |
35 |
8e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G21280.1 |
46 |
233 |
237 |
79.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold633 |
Augustus |
mRNA |
50381 |
51408 |
. |
- |
. |
ID=Dca50089.1;Parent=Dca50089 |
| scaffold633 |
Augustus |
exon |
50381 |
51181 |
. |
- |
. |
ID=Dca50089.1.exon1;Parent=Dca50089.1 |
| scaffold633 |
Augustus |
exon |
51394 |
51408 |
. |
- |
. |
ID=Dca50089.1.exon2;Parent=Dca50089.1 |
